Cohort Explorer - 3.0 Circular Genomic Viewer Does Not Display (Doc ID 1645502.1)

Last updated on JUNE 30, 2014

Applies to:

Oracle Health Sciences Cohort Explorer - Version 3.0 and later
Information in this document applies to any platform.

Symptoms

On : 3.0 version, Cohort Data Model issues

ACTUAL BEHAVIOR
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The Genomic Image does not display after selecting Plot Graph for a patient with an appropriate specimen for Circular Genomic Viewer.

EXPECTED BEHAVIOR
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The image should appear for the same patient and specimen just like in their TRC 2.0 installation.

STEPS
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The issue can be reproduced at will with the following steps:
1. – Enter the application – http://trcdev
2. Go to Single Patient Viewer and enter an ID and submit with “Derived Files” selected
3. Verify record has appropriate genomic files associated.
4. Go to “Circular Genomic Viewer.” Enter the same patient ID and submit
5. Select the file for viewing and select “Plot Graph”
6. The “Circular Genomics Viewer” in TRC 3.0 does not display as expected.


Cause

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